Index

Bioinformatics

Concepts

Assays

CUT&RUN

CUT&TAG

ChIP-seq

bulk RNA-seq

Transcription Factors

Peak Calling

Concepts

MachineLearning

Convolutional Layers

Residual Blocks

Transformers

Contributing

Contributing to the Blog

Maintaining the Wiki

Markdown

Journal-Club

Bacillus subtilis GRN

Qualifier Papers

Tools

Useful Tools

Git and Github

nextflow

SSH (secure shell)

Typst

VS code

meetings

Exec meeting Minutes (August 6th, 2025)

Meeting minutes August 18, 2025

Flyers

Student Meeting 08-25-2025